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Lagoon (A shallow coastal waterbody, completely or partly separated from a larger body of water by a barrier island, coral reef or other depositional feature)
| name | alternatenames | latitude | longitude | timezone | modification_date |
| Porto Novo Creek | 6.43444 | 3.32833 | Africa/Lagos | 1995-03-29 | |
| Middle Creek | 6.43278 | 3.38917 | Africa/Lagos | 1995-03-29 | |
| Mahin Lake | Mahin Lagoon,Mahin Lake | 6.18848 | 4.81805 | Africa/Lagos | 2020-01-08 |
| Lekki Lagoon | Lekki Lagoon | 6.50988 | 4.13266 | Africa/Lagos | 2012-01-18 |
| Lagos Lagoon | Lagos Lagoon | 6.49942 | 3.48003 | Africa/Lagos | 2015-08-07 |
| Kuramo Waters | 6.42389 | 3.435 | Africa/Lagos | 1995-06-13 | |
| Kradu Water | 6.58333 | 3.78333 | Africa/Lagos | 1994-01-05 | |
| Badagri Creek | 6.41722 | 3.33722 | Africa/Lagos | 1995-06-13 | |